# filelist

dirname: /usr/lib/python3.11/site-packages/salt/beacons
filetypes: fdffffffffffffffffffffffffffffffffff
filenames:
  __init__.py/__pycache__/adb.py/aix_account.py/avahi_announce.py/bonjour_announce.py/btmp.py/cert_info.py/diskusage.py/glxinfo.py/haproxy.py/inotify.py/journald.py/junos_rre_keys.py/load.py/log_beacon.py/memusage.py/napalm_beacon.py/network_info.py/network_settings.py/pkg.py/proxy_example.py/ps.py/salt_monitor.py/salt_proxy.py/sensehat.py/service.py/sh.py/smartos_imgadm.py/smartos_vmadm.py/status.py/swapusage.py/telegram_bot_msg.py/twilio_txt_msg.py/watchdog.py/wtmp.py


dirname: /usr/lib/python3.11/site-packages/salt/ext/tornado/test
filetypes: ffdffffffffffffffffffffffffffffffffffff
filenames:
  __init__.py/__main__.py/__pycache__/asyncio_test.py/auth_test.py/concurrent_test.py/curl_httpclient_test.py/escape_test.py/gen_test.py/http1connection_test.py/httpclient_test.py/httpserver_test.py/httputil_test.py/import_test.py/ioloop_test.py/iostream_test.py/locale_test.py/locks_test.py/log_test.py/netutil_test.py/options_test.py/process_test.py/queues_test.py/resolve_test_helper.py/routing_test.py/runtests.py/simple_httpclient_test.py/stack_context_test.py/tcpclient_test.py/tcpserver_test.py/template_test.py/testing_test.py/twisted_test.py/util.py/util_test.py/web_test.py/websocket_test.py/windows_test.py/wsgi_test.py


dirname: /usr/lib/python3.11/site-packages/salt/thorium/__pycache__
filetypes: ffffffffffffffffffffff
filenames:
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dirname: /usr/lib/python3.11/site-packages/salt/platform/__pycache__
filetypes: ffff
filenames:
  __init__.cpython-311.opt-1.pyc/__init__.cpython-311.pyc/win.cpython-311.opt-1.pyc/win.cpython-311.pyc


dirname: /usr/lib/python3.11/site-packages/salt/ext
filetypes: fdfdfffddff
filenames:
  __init__.py/__pycache__/backports_abc.py/importlib_metadata/ipaddress.py/saslprep.py/ssl_match_hostname.py/tornado/vsan/win_inet_pton.py/zipp.py


dirname: /usr/lib/python3.11/site-packages/salt/modules/__pycache__
filenames:
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filetypes:
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dirname: /usr/share/ugene/data/position_weight_matrix/JASPAR/plants
filetypes: ffffffffffffffffffffff
filenames:
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dirname: /usr/share/ugene/data/weight_matrix
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  blosum100.txt/blosum30.txt/blosum35.txt/blosum40.txt/blosum45.txt/blosum50.txt/blosum55.txt/blosum60.txt/blosum62.txt/blosum65.txt/blosum70.txt/blosum75.txt/blosum80.txt/blosum85.txt/blosum90.txt/blosumn.txt/dayhoff.txt/dna.txt/gonnet.txt/identity.txt/match.txt/md_10.txt/md_20.txt/md_40.txt/nuc.4.4.txt/pam10.txt/pam100.txt/pam110.txt/pam120.cdi.txt/pam120.txt/pam130.txt/pam140.txt/pam150.txt/pam160.cdi.txt/pam160.txt/pam170.txt/pam180.txt/pam190.txt/pam20.txt/pam200.cdi.txt/pam200.txt/pam210.txt/pam220.txt/pam230.txt/pam240.txt/pam250.cdi.txt/pam250.txt/pam260.txt/pam270.txt/pam280.txt/pam290.txt/pam30.txt/pam300.txt/pam310.txt/pam320.txt/pam330.txt/pam340.txt/pam350.txt/pam360.txt/pam370.txt/pam380.txt/pam390.txt/pam40.cdi.txt/pam40.txt/pam400.txt/pam410.txt/pam420.txt/pam430.txt/pam440.txt/pam450.txt/pam460.txt/pam470.txt/pam480.txt/pam490.txt/pam50.txt/pam500.txt/pam60.txt/pam70.txt/pam80.cdi.txt/pam80.txt/pam90.txt/rna.txt/vtml160.txt/vtml200.txt


dirname: /usr/share/ugene/data/back_translation/Vertebrates
filetypes: fffff
filenames:
  Gallus_gallus_(chicken).cut/Takifugu_rubripes_(Fugu_rubripes).cut/Xenopus_laevis_(African_clawed_frog).cut/mitochondrion_Gallus_gallus_(chicken).cut/mitochondrion_Takifugu_rubripes_(Fugu_rubripes).cut


dirname: /usr/share/ugene/data/workflow_samples/NGS/tuxedo
filetypes: ffffff
filenames:
  tuxedo_main.uwl/tuxedo_main_paired.uwl/tuxedo_no_novel_transcr.uwl/tuxedo_no_novel_transcr_paired.uwl/tuxedo_single_dataset.uwl/tuxedo_single_dataset_paired.uwl


dirname: /usr/share/ugene/data/sitecon_models/eukaryotic
filetypes: ffffffffffffffffffffffffffffffffffffffffffff
filenames:
  CEBP_a.sitecon.gz/CEBPall.sitecon.gz/CLOCK.sitecon.gz/CRE.sitecon.gz/E2F1.sitecon.gz/E2F1DP1sel1.sitecon.gz/EGR1.sitecon.gz/Eklf.sitecon.gz/GATA1.sitecon.gz/GATA_ALL.sitecon.gz/Gata2.sitecon.gz/Gata3.sitecon.gz/HMG1.sitecon.gz/HNF1.sitecon.gz/HNF3_4.sitecon.gz/HNF4.sitecon.gz/MYOGsel3.sitecon.gz/MyoD.sitecon.gz/NF1.sitecon.gz/NFATp.sitecon.gz/NFkB_all.sitecon.gz/NFkB_hetero.sitecon.gz/NFkB_homo.sitecon.gz/Nf_e2.sitecon.gz/Nrf2.sitecon.gz/Oct1.sitecon.gz/Oct_all.sitecon.gz/PPRE.sitecon.gz/Pu1.sitecon.gz/SRE_can.sitecon.gz/STAT.sitecon.gz/STAT1.sitecon.gz/TTF1.sitecon.gz/USF.sitecon.gz/cMyc_can.sitecon.gz/er2.sitecon.gz/irf.sitecon.gz/isre.sitecon.gz/nfy.sitecon.gz/p53.sitecon.gz/setCREB.sitecon.gz/setCREBzag.sitecon.gz/srf_all.sitecon.gz/yy1.sitecon.gz


dirname: /usr/share/ugene/data/back_translation/Primates
filetypes: ffff
filenames:
  Homo_sapiens_(human).cut/Pan_troglodytes_(chimpanzee).cut/mitochondrion_Homo_sapiens_(human).cut/mitochondrion_Pan_troglodytes_(chimpanzee).cut


dirname: /usr/share/ugene/data/workflow_samples/NGS
filetypes: fffffdffffffffffdfdf
filenames:
  chipseq_coverage.uwl/consensus.uwl/extract_coverage.uwl/extract_transcript_seq.uwl/fastqc.uwl/from_tools_menu_only/ngs_assembly_illumina_pe.uwl/ngs_assembly_illumina_pe_nanopore.uwl/ngs_assembly_illumina_se.uwl/ngs_transcriptomics_tophat_stringtie.uwl/ngs_transcriptomics_tuxedo.uwl/ngs_variant_annotation.uwl/ngs_variant_calling.uwl/ngs_variant_calling_full.uwl/raw_chip.uwl/raw_dna.uwl/raw_ngs/raw_rna.uwl/tuxedo/unmapped_reads.uwl


dirname: /usr/lib/.build-id
filetypes: ddddddddddddddddddddddddddddddddddddddddddddddd
filenames:
  01/03/05/0f/10/24/25/26/2b/32/3c/3f/46/49/5c/61/63/65/66/69/6f/80/87/8a/94/96/97/98/9f/a3/a4/ab/ae/b2/b4/bf/c4/ce/d6/d7/d8/e0/e9/ed/f2/f5/fa


dirname: /usr/share/ugene/data/back_translation/Mammalia
filetypes: fffff
filenames:
  Bos_taurus_(cow).cut/Canis_familiaris_(dog).cut/Sus_scrofa_(pig).cut/mitochondrion_Bos_taurus_(cow).cut/mitochondrion_Sus_scrofa_(pig).cut


dirname: /usr/share/ugene/data/position_weight_matrix/JASPAR/insects
filenames:
  MA0010.1.pfm/MA0011.1.pfm/MA0012.1.pfm/MA0013.1.pfm/MA0015.1.pfm/MA0016.1.pfm/MA0022.1.pfm/MA0023.1.pfm/MA0026.1.pfm/MA00445.1.pfm/MA0049.1.pfm/MA0085.1.pfm/MA0086.1.pfm/MA0094.2.pfm/MA0126.1.pfm/MA0165.1.pfm/MA0166.1.pfm/MA0167.1.pfm/MA0168.1.pfm/MA0169.1.pfm/MA0170.1.pfm/MA0171.1.pfm/MA0172.1.pfm/MA0173.1.pfm/MA0174.1.pfm/MA0175.1.pfm/MA0176.1.pfm/MA0177.1.pfm/MA0178.1.pfm/MA0179.1.pfm/MA0180.1.pfm/MA0181.1.pfm/MA0182.1.pfm/MA0183.1.pfm/MA0184.1.pfm/MA0185.1.pfm/MA0186.1.pfm/MA0187.1.pfm/MA0188.1.pfm/MA0189.1.pfm/MA0190.1.pfm/MA0191.1.pfm/MA0192.1.pfm/MA0193.1.pfm/MA0194.1.pfm/MA0195.1.pfm/MA0196.1.pfm/MA0197.1.pfm/MA0198.1.pfm/MA0199.1.pfm/MA0200.1.pfm/MA0201.1.pfm/MA0202.1.pfm/MA0203.1.pfm/MA0204.1.pfm/MA0205.1.pfm/MA0206.1.pfm/MA0207.1.pfm/MA0208.1.pfm/MA0209.1.pfm/MA0210.1.pfm/MA0211.1.pfm/MA0212.1.pfm/MA0213.1.pfm/MA0214.1.pfm/MA0215.1.pfm/MA0216.1.pfm/MA0217.1.pfm/MA0218.1.pfm/MA0219.1.pfm/MA0220.1.pfm/MA0221.1.pfm/MA0222.1.pfm/MA0223.1.pfm/MA0224.1.pfm/MA0225.1.pfm/MA0226.1.pfm/MA0227.1.pfm/MA0228.1.pfm/MA0229.1.pfm/MA0230.1.pfm/MA0231.1.pfm/MA0232.1.pfm/MA0233.1.pfm/MA0234.1.pfm/MA0235.1.pfm/MA0236.1.pfm/MA0237.1.pfm/MA0238.1.pfm/MA0239.1.pfm/MA0240.1.pfm/MA0241.1.pfm/MA0242.1.pfm/MA0243.1.pfm/MA0244.1.pfm/MA0245.1.pfm/MA0246.1.pfm/MA0247.1.pfm/MA0248.1.pfm/MA0249.1.pfm/MA0250.1.pfm/MA0251.1.pfm/MA0252.1.pfm/MA0253.1.pfm/MA0254.1.pfm/MA0255.1.pfm/MA0256.1.pfm/MA0257.1.pfm/MA0443.1.pfm/MA0444.1.pfm/MA0446.1.pfm/MA0447.1.pfm/MA0448.1.pfm/MA0449.1.pfm/MA0450.1.pfm/MA0451.1.pfm/MA0452.1.pfm/MA0453.1.pfm/MA0454.1.pfm/MA0455.1.pfm/MA0456.1.pfm/MA0457.1.pfm/MA0458.1.pfm/MA0459.1.pfm/MA0460.1.pfm/matrix_list.txt

filetypes:
[cell repeats an earlier one in this file: 126 characters]


dirname: /usr/share/ugene/data/workflow_samples/Custom elements
filetypes: fffff
filenames:
  casava-fastq-filter.uwl/fastq-trimmer.uwl/script-dump-sequence-info.uwl/script-linkdata-fetch-seq.uwl/script-quality-filter.uwl


dirname: /usr/share/ugene/data/position_weight_matrix/UniPROBE/Cell08
filenames:
  Alx3_3418.2.pwm/Alx4_1744.1.pwm/Arx_1738.2.pwm/Bapx1_2343.1.pwm/Barhl1_2590.2.pwm/Barhl2_3868.1.pwm/Barx1_2877.1.pwm/Barx2_3447.2.pwm/Bsx_3483.2.pwm/Cart1_0997.1.pwm/Cart1_1275.1.pwm/Cdx1_2245.1.pwm/Cdx2_4272.1.pwm/Cphx_3484.1.pwm/Crx_3485.1.pwm/Cutl1_3494.1.pwm/Cutl1_3494.2.pwm/Dbx1_3486.1.pwm/Dbx2_3487.1.pwm/Dlx1_1741.2.pwm/Dlx2_2273.2.pwm/Dlx3_1030.1.pwm/Dlx4_3488.2.pwm/Dlx5_3419.2.pwm/Dmbx1_2277.1.pwm/Dobox4_3956.2.pwm/Dobox5_3493.1.pwm/Duxl_1286.2.pwm/Emx2_3420.1.pwm/En1_3123.2.pwm/En2_0952.1.pwm/Esx1_3124.2.pwm/Evx1_3952.2.pwm/Evx2_2645.3.pwm/Gbx1_2883.2.pwm/Gbx2_3110.1.pwm/Gsc_2327.3.pwm/Gsh2_3990.2.pwm/Hdx_3845.3.pwm/Hlx1_2350.1.pwm/Hlxb9_3422.1.pwm/Hmbox1_2674.1.pwm/Hmx1_3423.1.pwm/Hmx2_3424.3.pwm/Hmx3_3490.2.pwm/Homez_1063.2.pwm/Hoxa10_2318.1.pwm/Hoxa11_2218.1.pwm/Hoxa13_3126.1.pwm/Hoxa1_3425.1.pwm/Hoxa2_3079.1.pwm/Hoxa3_2783.2.pwm/Hoxa4_3426.1.pwm/Hoxa5_3415.1.pwm/Hoxa6_1040.1.pwm/Hoxa7_2668.2.pwm/Hoxa7_3750.1.pwm/Hoxa9_2622.2.pwm/Hoxb13_3479.1.pwm/Hoxb3_1720.2.pwm/Hoxb4_2627.1.pwm/Hoxb5_3122.2.pwm/Hoxb6_3428.2.pwm/Hoxb7_3953.1.pwm/Hoxb8_3780.2.pwm/Hoxb9_3413.1.pwm/Hoxc10_2779.2.pwm/Hoxc11_3718.2.pwm/Hoxc12_3480.1.pwm/Hoxc13_3127.1.pwm/Hoxc4_3491.1.pwm/Hoxc5_2630.2.pwm/Hoxc6_3954.2.pwm/Hoxc8_3429.2.pwm/Hoxc9_2367.2.pwm/Hoxd10_2368.2.pwm/Hoxd11_3873.1.pwm/Hoxd12_3481.1.pwm/Hoxd13_2356.1.pwm/Hoxd1_3448.1.pwm/Hoxd3_1742.2.pwm/Hoxd8_2644.1.pwm/Ipf1_3815.1.pwm/Irx2_0900.3.pwm/Irx3_0920.1.pwm/Irx3_2226.1.pwm/Irx4_2242.3.pwm/Irx5_2385.1.pwm/Irx6_2623.2.pwm/Isl2_3430.1.pwm/Isx_3445.1.pwm/Lbx2_3869.2.pwm/Lhx1_2240.2.pwm/Lhx2_0953.2.pwm/Lhx3_3431.1.pwm/Lhx4_1719.2.pwm/Lhx5_2279.1.pwm/Lhx6_2272.1.pwm/Lhx6_3432.1.pwm/Lhx8_2247.2.pwm/Lhx9_3492.1.pwm/Lmx1a_2238.2.pwm/Lmx1b_3433.2.pwm/Meis1_2335.1.pwm/Meox1_2310.2.pwm/Mrg1_2246.2.pwm/Mrg2_2302.1.pwm/Msx1_3031.2.pwm/Msx2_3449.1.pwm/Msx3_3206.1.pwm/Nkx1-1_3856.3.pwm/Nkx1-2_3214.1.pwm/Nkx2-2_2823.1.pwm/Nkx2-3_3435.1.pwm/Nkx2-4_3074.1.pwm/Nkx2-5_3436.1.pwm/Nkx2-6_3437.1.pwm/Nkx2-9_3082.1.pwm/Nkx3-1_2923.2.pwm/Nkx6-1_2825.1.pwm/Nkx6-1_2825.2.pwm/Nkx6-3_3446.1.pwm/Obox1_3970.2.pwm/Obox2_3438.2.pwm/Obox3_3439.1.pwm/Obox5_2284.1.pwm/Obox5_3963.2.pwm/Obox6_3440.2.pwm/Og2x_3719.1.pwm/Otp_3496.1.pwm/Otx1_2325.1.pwm/Otx2_3441.1.pwm/Pax4_3989.2.pwm/Pax6_3838.3.pwm/Pax7_3783.1.pwm/Pbx1_3203.1.pwm/Phox2a_3947.1.pwm/Phox2b_3948.1.pwm/Pitx1_2312.1.pwm/Pitx2_2274.3.pwm/Pitx3_3497.2.pwm/Pknox1_2364.2.pwm/Pknox2_3077.2.pwm/Pou1f1_3818.1.pwm/Pou2f1_3081.2.pwm/Pou2f2_3748.1.pwm/Pou2f3_3986.2.pwm/Pou3f1_3819.1.pwm/Pou3f2_2824.1.pwm/Pou3f3_3235.2.pwm/Pou3f4_3773.1.pwm/Pou4f3_2791.1.pwm/Pou6f1_1731.2.pwm/Pou6f1_3733.1.pwm/Prop1_3949.1.pwm/Prrx1_3442.1.pwm/Prrx2_3072.1.pwm/Rax_3443.1.pwm/Rhox11_1765.2.pwm/Rhox11_2205.1.pwm/Rhox6_4251.1.pwm/Shox2_2641.2.pwm/Six1_0935.2.pwm/Six2_2307.2.pwm/Six3_1732.2.pwm/Six4_2860.1.pwm/Six6_2267.4.pwm/Six6_2267.5.pwm/Tcf1_2666.2.pwm/Tcf2_0913.2.pwm/Tgif1_2342.2.pwm/Tgif2_3451.1.pwm/Titf1_1722.2.pwm/Tlx2_3498.2.pwm/Uncx4.1_2281.2.pwm/Vax1_3499.1.pwm/Vax2_3500.1.pwm/Vsx1_1728.1.pwm

filetypes:
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dirname: /usr/lib64/ugene
filetypes: fffffffffffffdfffff
filenames:
  data/libQSpec.so/libU2Algorithm.so/libU2Core.so/libU2Designer.so/libU2Formats.so/libU2Gui.so/libU2Lang.so/libU2Private.so/libU2Script.so/libU2Test.so/libU2View.so/libbreakpad.so/plugins/plugins_checker/ugene/ugenecl/ugenem/ugeneui


dirname: /usr/share/ugene/data/samples
filetypes: dddddddddddddddddddd
filenames:
  ABIF/ACE/APR/Assembly/CLUSTALW/EMBL/FASTA/FASTQ/GFF/Genbank/HMM/MMDB/MSF/Newick/PDB/Raw/SCF/Sanger/Stockholm/Swiss-Prot


dirname: /usr/share/ugene/data/position_weight_matrix/UniPROBE/GR09
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